Development of a visual scoring method to determine inflamed, excluded or desert immune phenotype in Non-Small Cell Lung Cancer, Colorectal Cancer, and Urothelial Cancer

November 7, 2024

Development of a visual scoring method to determine inflamed, excluded or desert immune phenotype in Non-Small Cell Lung Cancer, Colorectal Cancer, and Urothelial Cancer

Development of a visual scoring method to determine inflamed, excluded or desert immune phenotype in Non-Small Cell Lung Cancer, Colorectal Cancer, and Urothelial Cancer

November 7, 2024

Development of a visual scoring method to determine inflamed, excluded or desert immune phenotype in Non-Small Cell Lung Cancer, Colorectal Cancer, and Urothelial Cancer

Accelerating analysis of cytometry data sets leveraging a visualization tool built within CellEngine, a cloud-based cytometry analysis software

November 7, 2024

Accelerating analysis of cytometry data sets leveraging a visualization tool built within CellEngine, a cloud-based cytometry analysis software

Accelerating analysis of cytometry data sets leveraging a visualization tool built within CellEngine, a cloud-based cytometry analysis software

November 7, 2024

Accelerating analysis of cytometry data sets leveraging a visualization tool built within CellEngine, a cloud-based cytometry analysis software

Analyzing CITE-seq data like an immunologist with a hybrid hierarchical gating approach in CellEngine software

October 29, 2024

Matt Clutter

Analyzing CITE-seq data like an immunologist with a hybrid hierarchical gating approach in CellEngine software

Analyzing CITE-seq data like an immunologist with a hybrid hierarchical gating approach in CellEngine software

October 29, 2024

Matt Clutter

Analyzing CITE-seq data like an immunologist with a hybrid hierarchical gating approach in CellEngine software

MHC Class II Predicts Anti-PD-L1 Response in Urothelial Cancer

May 28, 2024

CellCarta’s poster, presented at ASCO 2024, discusses the study on tumor-specific MHC class II upregulation in patients with urothelial cancer undergoing anti-PD-L1 therapy.

The study, part of the abacus trial (NCT02662309), revealed that MHC class II expression in tumor cells, although rare, is associated with a positive response to atezolizumab. Utilizing spatial transcriptomics and immunohistochemistry (IHC), the research highlighted significant differences in MHC II expression between patients with pathological complete response (pCR) and those with major pathological response (MPR) or relapse.

The findings suggest that MHC II expression could serve as a biomarker for predicting therapeutic outcomes in bladder cancer treatment.

View the full poster:

Tumor-specific MHC class II upregulation associated with response to anti-PD-L1 therapy in patients with urothelial cancer

MHC Class II Upregulation Predicts Anti-PD-L1 Therapy Response in Urothelial Cancer

MHC Class II Predicts Anti-PD-L1 Response in Urothelial Cancer

May 28, 2024

CellCarta’s poster, presented at ASCO 2024, discusses the study on tumor-specific MHC class II upregulation in patients with urothelial cancer undergoing anti-PD-L1 therapy.

The study, part of the abacus trial (NCT02662309), revealed that MHC class II expression in tumor cells, although rare, is associated with a positive response to atezolizumab. Utilizing spatial transcriptomics and immunohistochemistry (IHC), the research highlighted significant differences in MHC II expression between patients with pathological complete response (pCR) and those with major pathological response (MPR) or relapse.

The findings suggest that MHC II expression could serve as a biomarker for predicting therapeutic outcomes in bladder cancer treatment.

View the full poster:

Tumor-specific MHC class II upregulation associated with response to anti-PD-L1 therapy in patients with urothelial cancer

MHC Class II Upregulation Predicts Anti-PD-L1 Therapy Response in Urothelial Cancer

Analyze single-cell sequencing data with CellEngine.

May 4, 2024

CellCarta’s poster details the analysis of multimodal single cell sequencing data using CellEngine software.

The study leverages CITE-seq, a technique that combines protein and gene expression analysis, to investigate immune cell populations. By comparing hierarchical gating—a method familiar to immunologists—with unbiased clustering, the research identifies clear definitions based on marker expression levels. The hybrid approach of using both gating and clustering enhances the identification and characterization of cell types, providing a more intuitive analysis of complex datasets.

The study specifically examines populations such as MAIT cells, highlighting differences in gene and protein expression to refine gating strategies.

View the full poster:

Analyzing multimodal single cell sequencing data like an Immunologist with hierarchical gating in CellEngine software

Analyze single-cell sequencing data with CellEngine.

May 4, 2024

CellCarta’s poster details the analysis of multimodal single cell sequencing data using CellEngine software.

The study leverages CITE-seq, a technique that combines protein and gene expression analysis, to investigate immune cell populations. By comparing hierarchical gating—a method familiar to immunologists—with unbiased clustering, the research identifies clear definitions based on marker expression levels. The hybrid approach of using both gating and clustering enhances the identification and characterization of cell types, providing a more intuitive analysis of complex datasets.

The study specifically examines populations such as MAIT cells, highlighting differences in gene and protein expression to refine gating strategies.

View the full poster:

Analyzing multimodal single cell sequencing data like an Immunologist with hierarchical gating in CellEngine software