Our genomic data analysis service has developed bio-IT pipelines for gene expression (e.g.,RNA sequencing and NanoString nCounter),quantitative PCR and digital PCR datasets,whole genome and whole exome sequencing,single-cell sequencing analysis,and spatial biology datasets. Standard processing and custom analysis are both available,and data transfer can be tailored to project-specific needs using AWS S3,SFTP,or proprietary platforms.
\nCellEngine®is CellCarta's proprietary cytometry analysis software,used to power global flow cytometry analysis services. It is available as part of our bioanalytical workflow or as a SaaS platform,allowing clients to analyze their FCS files independently. CellEngine®is compatible with FCS files from more than 45 cytometers and is validated for use in 21 CFR 11-compliant environments. Furthermore, API toolkits in R and Python support integration with LIMS,ELN,and EMR systems.
"},{"faq_question":"How does CellCarta approach bioinformatics reporting?","faq_answer":"CellCarta provides both standard and customized reports, determined by study design and the statistical analysis plan. Customized reports can include ratios,basic normalization,and biological interpretation to accelerate understanding of complex datasets. The bioinformatics and biostatistics team employs exploratory data analysis to identify outliers and patterns,normalization to remove sample processing bias,expression analysis to assess relationships between clinical variables and expression levels,visualization tools such as heatmaps for context and interpretation,machine learning for biomarker classification and predictive panel design,clustering to improve patient grouping,and pathway analysis to understand mechanisms of action.
\nSee our bioinformatics services to learn more.
"}]}#-supreme-cellcarta-featured-resources-8-168{cards-data:[{"image_url":"\/wp-content\/uploads\/2026\/05\/webinar.jpg","card_type":"Webinar","date":"Feb 12","reading_time":"Reading Time - 5 minutes","title":"Resources Title Goes Here","description":"Lorem ipsum dolor sit amet,consectetuer adipiscing elit. Aenean commodo ligula eget dolor.","url":"#"},{"image_url":"\/wp-content\/uploads\/2026\/05\/webinar-2.jpg","card_type":"Webinar","date":"Feb 12","reading_time":"Reading Time - 5 minutes","title":"Resources Title Goes Here","description":"Lorem ipsum dolor sit amet,consectetuer adipiscing elit. Aenean commodo ligula eget dolor.","url":"#"},{"image_url":"\/wp-content\/uploads\/2026\/05\/webinar-3.jpg","card_type":"Webinar","date":"Feb 12","reading_time":"Reading Time - 5 minutes","title":"Resources Title Goes Here","description":"Lorem ipsum dolor sit amet,consectetuer adipiscing elit. Aenean commodo ligula eget dolor.","url":"#"}]}#-supreme-cellcarta-overview-4-168{stats-data:[{"number":"25+","label":"Years of biomarker expertise "},{"number":"90+ ","label":"Validated analysis pipelines "},{"number":"750+ ","label":"Expert scientist"}]}#-supreme-cellcarta-service-blocks-14-168{blocks-data:[{"image":"https://cellcarta.com/wp-content/uploads/2026/06/Bioinformatics-Services-Hero-166.jpg","image_alt":"","title":"Bioinformatics Services ","description":"Powerful sample analysis with standard or customized reporting that aligns to your study. ","button_text":"Explore Bioinformatics Services","button_url":"/clinical-trial-services/ai-data-analytics/bioinformatics-biostatistics/","button_target":"_self"},{"image":"https://cellcarta.com/wp-content/uploads/2026/06/Genomic-Data-Analysis-hero.jpg","image_alt":"","title":"Genomic Data Analysis","description":"Validated,scalable analysis pipelines with outputs designed for regulatory submission. ","button_text":"Explore Genomic Data Analysis","button_url":"/capabilities/genomics/genomic-data-analysis-services/","button_target":""},{"image":"https://cellcarta.com/wp-content/uploads/2026/07/CellCarta_-44-scaled.jpg","image_alt":"","title":"CellEngine® Software ","description":"Exceptional flow cytometry analysis with supervised autogating and advanced capabilities. ","button_text":"Explore Our CellEngine software","button_url":"/clinical-trial-services/ai-data-analytics/cellengine-cytometry-software/","button_target":""}]}